Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX7Q2KHR2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AC211486.1-202ENST00000416371 468 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AC211476.1-201ENST00000503899 468 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AC096734.2-201ENST00000562054 433 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 MIR4469-201ENST00000583919 79 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AL078644.1-201ENST00000609881 752 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 C20orf181-201ENST00000623918 480 ntBASIC20.66■□□□□ 0.9
RFX7Q2KHR2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX7Q2KHR2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 KRT19P2-202ENST00000557173 1012 ntBASIC20.65■□□□□ 0.9
RFX7Q2KHR2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX7Q2KHR2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX7Q2KHR2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 RPS8P6-201ENST00000426177 609 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 MKNK2P1-201ENST00000437526 628 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 AC087163.2-201ENST00000457299 853 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TUBB8P12-201ENST00000308911 1335 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TUBB7P-202ENST00000428444 1305 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 TUBB8P7-204ENST00000567960 1332 ntBASIC20.64■□□□□ 0.89
RFX7Q2KHR2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX7Q2KHR2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms