Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAPQ12770 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAPQ12770 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAPQ12770 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.71■□□□□ 0.43
SCAPQ12770 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.71■□□□□ 0.43
SCAPQ12770 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.71■□□□□ 0.43
SCAPQ12770 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAPQ12770 AC098831.1-202ENST00000438821 336 ntBASIC17.71■□□□□ 0.43
SCAPQ12770 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAPQ12770 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 AL356488.2-201ENST00000602755 427 ntBASIC17.71■□□□□ 0.43
SCAPQ12770 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 PGM5P2-202ENST00000637225 1043 ntBASIC17.71■□□□□ 0.43
SCAPQ12770 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SCAPQ12770 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAPQ12770 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.71■□□□□ 0.43
SCAPQ12770 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.71■□□□□ 0.43
SCAPQ12770 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAPQ12770 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SCAPQ12770 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAPQ12770 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SCAPQ12770 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCAPQ12770 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCAPQ12770 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SCAPQ12770 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCAPQ12770 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCAPQ12770 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCAPQ12770 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCAPQ12770 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCAPQ12770 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCAPQ12770 RPS15P9-201ENST00000494093 319 ntBASIC17.7■□□□□ 0.42
SCAPQ12770 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.7■□□□□ 0.42
SCAPQ12770 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SCAPQ12770 AL049840.3-201ENST00000602669 611 ntBASIC17.7■□□□□ 0.42
SCAPQ12770 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.7■□□□□ 0.42
SCAPQ12770 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 MIR1199-201ENST00000621445 119 ntBASIC17.7■□□□□ 0.42
SCAPQ12770 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCAPQ12770 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SCAPQ12770 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
SCAPQ12770 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.7■□□□□ 0.42
SCAPQ12770 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCAPQ12770 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 AP002414.3-201ENST00000589352 1468 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCAPQ12770 FZD10-202ENST00000539839 3282 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.69■□□□□ 0.42
SCAPQ12770 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 AP001160.2-201ENST00000596071 487 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 AC008667.4-201ENST00000607370 168 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCAPQ12770 AC138932.1-201ENST00000534164 6830 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCAPQ12770 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 AC092068.3-201ENST00000587894 2016 ntBASIC17.69■□□□□ 0.42
SCAPQ12770 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAPQ12770 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAPQ12770 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms