Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.98■□□□□ 0.79
IRX3P78415 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX3P78415 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IRX3P78415 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
IRX3P78415 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
IRX3P78415 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.98■□□□□ 0.79
IRX3P78415 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.98■□□□□ 0.79
IRX3P78415 AC006116.8-202ENST00000587620 1550 ntBASIC19.98■□□□□ 0.79
IRX3P78415 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX3P78415 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.98■□□□□ 0.79
IRX3P78415 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IRX3P78415 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
IRX3P78415 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.97■□□□□ 0.79
IRX3P78415 AC046185.3-201ENST00000623228 1824 ntBASIC19.97■□□□□ 0.79
IRX3P78415 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 KRT18P55-202ENST00000578578 1546 ntBASIC19.97■□□□□ 0.79
IRX3P78415 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
IRX3P78415 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
IRX3P78415 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
IRX3P78415 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.97■□□□□ 0.79
IRX3P78415 AC112191.1-201ENST00000523689 701 ntBASIC19.97■□□□□ 0.79
IRX3P78415 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.97■□□□□ 0.79
IRX3P78415 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
IRX3P78415 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.97■□□□□ 0.79
IRX3P78415 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
IRX3P78415 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 AC092919.2-201ENST00000623631 1645 ntBASIC19.97■□□□□ 0.79
IRX3P78415 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX3P78415 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX3P78415 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.96■□□□□ 0.79
IRX3P78415 AC022145.2-201ENST00000598203 171 ntBASIC19.96■□□□□ 0.79
IRX3P78415 ACTL9-202ENST00000612068 1252 ntBASIC19.96■□□□□ 0.79
IRX3P78415 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 AL135999.2-201ENST00000622438 1686 ntBASIC19.96■□□□□ 0.79
IRX3P78415 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.96■□□□□ 0.79
IRX3P78415 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
IRX3P78415 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX3P78415 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
IRX3P78415 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
IRX3P78415 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
IRX3P78415 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
IRX3P78415 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.95■□□□□ 0.78
IRX3P78415 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.95■□□□□ 0.78
IRX3P78415 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.95■□□□□ 0.78
IRX3P78415 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.95■□□□□ 0.78
IRX3P78415 AC093512.1-201ENST00000617969 520 ntBASIC19.95■□□□□ 0.78
IRX3P78415 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 AC009053.2-201ENST00000563701 2365 ntBASIC19.95■□□□□ 0.78
IRX3P78415 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IRX3P78415 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms