Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 AL135999.2-201ENST00000622438 1686 ntBASIC17.37■□□□□ 0.37
PRAMEP78395 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEP78395 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEP78395 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEP78395 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEP78395 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEP78395 PMPCAP1-201ENST00000508114 1576 ntBASIC17.36■□□□□ 0.37
PRAMEP78395 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRAMEP78395 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRAMEP78395 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEP78395 HCG4P8-203ENST00000443049 980 ntBASIC17.36■□□□□ 0.37
PRAMEP78395 MIR5100-201ENST00000579544 119 ntBASIC17.36■□□□□ 0.37
PRAMEP78395 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 AL591684.3-201ENST00000605187 298 ntBASIC17.36■□□□□ 0.37
PRAMEP78395 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PRAMEP78395 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEP78395 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEP78395 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEP78395 AC022211.2-201ENST00000585075 2527 ntBASIC17.36■□□□□ 0.37
PRAMEP78395 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 LINC02012-201ENST00000608206 1725 ntBASIC17.35■□□□□ 0.37
PRAMEP78395 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRAMEP78395 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.35■□□□□ 0.37
PRAMEP78395 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 KRT16P4-201ENST00000453883 522 ntBASIC17.35■□□□□ 0.37
PRAMEP78395 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.35■□□□□ 0.37
PRAMEP78395 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.35■□□□□ 0.37
PRAMEP78395 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.35■□□□□ 0.37
PRAMEP78395 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms