Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.31■□□□□ 0.2
GABREP78334 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 AC138649.4-201ENST00000612222 287 ntBASIC16.31■□□□□ 0.2
GABREP78334 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.31■□□□□ 0.2
GABREP78334 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GABREP78334 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GABREP78334 ABALON-201ENST00000629058 1903 ntBASIC16.31■□□□□ 0.2
GABREP78334 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.31■□□□□ 0.2
GABREP78334 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABREP78334 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.3■□□□□ 0.2
GABREP78334 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GABREP78334 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GABREP78334 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 AC236430.1-201ENST00000402231 743 ntBASIC16.3■□□□□ 0.2
GABREP78334 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.3■□□□□ 0.2
GABREP78334 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.3■□□□□ 0.2
GABREP78334 AC087163.2-201ENST00000457299 853 ntBASIC16.3■□□□□ 0.2
GABREP78334 AC069335.1-201ENST00000489972 472 ntBASIC16.3■□□□□ 0.2
GABREP78334 SLC25A6P2-201ENST00000497974 877 ntBASIC16.3■□□□□ 0.2
GABREP78334 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.3■□□□□ 0.2
GABREP78334 AC079140.1-201ENST00000508039 487 ntBASIC16.3■□□□□ 0.2
GABREP78334 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.3■□□□□ 0.2
GABREP78334 AC087641.1-201ENST00000557561 1021 ntBASIC16.3■□□□□ 0.2
GABREP78334 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GABREP78334 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GABREP78334 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GABREP78334 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
GABREP78334 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 TUBB3P1-201ENST00000405796 1332 ntBASIC16.29■□□□□ 0.2
GABREP78334 AC063926.2-201ENST00000623766 1308 ntBASIC16.29■□□□□ 0.2
GABREP78334 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 TFAMP1-201ENST00000412727 736 ntBASIC16.29■□□□□ 0.2
GABREP78334 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.29■□□□□ 0.2
GABREP78334 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.29■□□□□ 0.2
GABREP78334 AC051619.7-201ENST00000568314 623 ntBASIC16.29■□□□□ 0.2
GABREP78334 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.29■□□□□ 0.2
GABREP78334 AL645728.2-201ENST00000641974 660 ntBASIC16.29■□□□□ 0.2
GABREP78334 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GABREP78334 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
GABREP78334 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms