Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
YBX1P67809 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
YBX1P67809 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.77■□□□□ 0.27
YBX1P67809 RNF216P1-203ENST00000404404 2427 ntBASIC16.77■□□□□ 0.27
YBX1P67809 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.77■□□□□ 0.27
YBX1P67809 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
YBX1P67809 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
YBX1P67809 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.76■□□□□ 0.27
YBX1P67809 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
YBX1P67809 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 AC079328.2-201ENST00000561241 3354 ntBASIC16.76■□□□□ 0.27
YBX1P67809 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
YBX1P67809 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 MYCLP1-201ENST00000372451 1075 ntBASIC16.76■□□□□ 0.27
YBX1P67809 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
YBX1P67809 TPM4P1-201ENST00000436100 807 ntBASIC16.76■□□□□ 0.27
YBX1P67809 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
YBX1P67809 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 AC025062.2-201ENST00000605477 670 ntBASIC16.76■□□□□ 0.27
YBX1P67809 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.76■□□□□ 0.27
YBX1P67809 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
YBX1P67809 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YBX1P67809 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.76■□□□□ 0.27
YBX1P67809 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.75■□□□□ 0.27
YBX1P67809 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 FAAHP1-202ENST00000446499 1238 ntBASIC16.75■□□□□ 0.27
YBX1P67809 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.75■□□□□ 0.27
YBX1P67809 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 RNPS1P1-201ENST00000507437 918 ntBASIC16.75■□□□□ 0.27
YBX1P67809 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
YBX1P67809 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.75■□□□□ 0.27
YBX1P67809 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.75■□□□□ 0.27
YBX1P67809 MTDHP4-201ENST00000600287 670 ntBASIC16.75■□□□□ 0.27
YBX1P67809 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
YBX1P67809 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
YBX1P67809 AC092053.1-201ENST00000605787 1936 ntBASIC16.74■□□□□ 0.27
YBX1P67809 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms