Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SKP1P63208 AP002414.1-201ENST00000391405 1147 ntBASIC16.33■□□□□ 0.2
SKP1P63208 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.33■□□□□ 0.2
SKP1P63208 KRT18P27-201ENST00000427733 1299 ntBASIC16.33■□□□□ 0.2
SKP1P63208 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.33■□□□□ 0.2
SKP1P63208 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 AL356488.2-201ENST00000602755 427 ntBASIC16.33■□□□□ 0.2
SKP1P63208 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.33■□□□□ 0.2
SKP1P63208 AC093525.9-201ENST00000624961 1746 ntBASIC16.33■□□□□ 0.2
SKP1P63208 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SKP1P63208 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SKP1P63208 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SKP1P63208 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 HLA-A-201ENST00000376802 1334 ntBASIC16.32■□□□□ 0.2
SKP1P63208 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.32■□□□□ 0.2
SKP1P63208 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.32■□□□□ 0.2
SKP1P63208 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.32■□□□□ 0.2
SKP1P63208 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.32■□□□□ 0.2
SKP1P63208 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.32■□□□□ 0.2
SKP1P63208 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SKP1P63208 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 AF228730.7-201ENST00000641842 219 ntBASIC16.32■□□□□ 0.2
SKP1P63208 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SKP1P63208 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SKP1P63208 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
SKP1P63208 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.32■□□□□ 0.2
SKP1P63208 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SKP1P63208 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.31■□□□□ 0.2
SKP1P63208 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SKP1P63208 AC116353.5-201ENST00000638148 1699 ntBASIC16.31■□□□□ 0.2
SKP1P63208 EGFEM1P-202ENST00000431685 1563 ntBASIC16.31■□□□□ 0.2
SKP1P63208 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.31■□□□□ 0.2
SKP1P63208 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms