Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.84■□□□□ 0.61
ATN1P54259 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATN1P54259 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATN1P54259 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ATN1P54259 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.84■□□□□ 0.61
ATN1P54259 AC022494.1-201ENST00000466044 728 ntBASIC18.84■□□□□ 0.61
ATN1P54259 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.84■□□□□ 0.61
ATN1P54259 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.84■□□□□ 0.61
ATN1P54259 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ATN1P54259 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
ATN1P54259 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 CROCCP3-202ENST00000420820 1947 ntBASIC18.84■□□□□ 0.61
ATN1P54259 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATN1P54259 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.83■□□□□ 0.61
ATN1P54259 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATN1P54259 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATN1P54259 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.83■□□□□ 0.61
ATN1P54259 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ATN1P54259 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 ARSEP1-201ENST00000420443 635 ntBASIC18.83■□□□□ 0.6
ATN1P54259 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 HNRNPA1P23-201ENST00000491091 1133 ntBASIC18.83■□□□□ 0.6
ATN1P54259 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 AP000842.3-202ENST00000569238 1080 ntBASIC18.83■□□□□ 0.6
ATN1P54259 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.83■□□□□ 0.6
ATN1P54259 AC027307.2-201ENST00000591252 911 ntBASIC18.83■□□□□ 0.6
ATN1P54259 AL590560.3-201ENST00000623350 461 ntBASIC18.83■□□□□ 0.6
ATN1P54259 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ATN1P54259 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ATN1P54259 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.83■□□□□ 0.6
ATN1P54259 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.83■□□□□ 0.6
ATN1P54259 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.83■□□□□ 0.6
ATN1P54259 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATN1P54259 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
ATN1P54259 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATN1P54259 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATN1P54259 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.82■□□□□ 0.6
ATN1P54259 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.82■□□□□ 0.6
ATN1P54259 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC18.82■□□□□ 0.6
ATN1P54259 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.82■□□□□ 0.6
ATN1P54259 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.82■□□□□ 0.6
ATN1P54259 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.82■□□□□ 0.6
ATN1P54259 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATN1P54259 AC073592.8-201ENST00000624126 511 ntBASIC18.82■□□□□ 0.6
ATN1P54259 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.82■□□□□ 0.6
ATN1P54259 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.82■□□□□ 0.6
ATN1P54259 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
ATN1P54259 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.82■□□□□ 0.6
ATN1P54259 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 WASH6P-202ENST00000359512 1437 ntBASIC18.82■□□□□ 0.6
ATN1P54259 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.82■□□□□ 0.6
ATN1P54259 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATN1P54259 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.81■□□□□ 0.6
ATN1P54259 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.81■□□□□ 0.6
ATN1P54259 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.81■□□□□ 0.6
ATN1P54259 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.81■□□□□ 0.6
ATN1P54259 AC022148.2-201ENST00000586176 560 ntBASIC18.81■□□□□ 0.6
ATN1P54259 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC18.81■□□□□ 0.6
ATN1P54259 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 HTR7P1-202ENST00000624664 4411 ntBASIC18.81■□□□□ 0.6
ATN1P54259 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms