Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATXN3P54252 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATXN3P54252 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.62■□□□□ 0.41
ATXN3P54252 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATXN3P54252 AC141586.5-201ENST00000624546 2050 ntBASIC17.62■□□□□ 0.41
ATXN3P54252 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATXN3P54252 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATXN3P54252 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATXN3P54252 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.62■□□□□ 0.41
ATXN3P54252 MYLKP1-201ENST00000509077 1580 ntBASIC17.62■□□□□ 0.41
ATXN3P54252 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.61■□□□□ 0.41
ATXN3P54252 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ATXN3P54252 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 AL024508.2-201ENST00000607749 1894 ntBASIC17.61■□□□□ 0.41
ATXN3P54252 FER1L4-210ENST00000615531 5998 ntBASIC17.61■□□□□ 0.41
ATXN3P54252 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATXN3P54252 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.61■□□□□ 0.41
ATXN3P54252 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.61■□□□□ 0.41
ATXN3P54252 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ATXN3P54252 SNHG9-202ENST00000564014 471 ntBASIC17.61■□□□□ 0.41
ATXN3P54252 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.61■□□□□ 0.41
ATXN3P54252 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.61■□□□□ 0.41
ATXN3P54252 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.61■□□□□ 0.41
ATXN3P54252 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ATXN3P54252 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 AC022211.2-201ENST00000585075 2527 ntBASIC17.61■□□□□ 0.41
ATXN3P54252 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.61■□□□□ 0.41
ATXN3P54252 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.61■□□□□ 0.41
ATXN3P54252 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATXN3P54252 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 SDHAP2-201ENST00000455183 2001 ntBASIC17.6■□□□□ 0.41
ATXN3P54252 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATXN3P54252 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATXN3P54252 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
ATXN3P54252 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 AL596442.2-201ENST00000610240 980 ntBASIC17.6■□□□□ 0.41
ATXN3P54252 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.6■□□□□ 0.41
ATXN3P54252 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
ATXN3P54252 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATXN3P54252 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.6■□□□□ 0.41
ATXN3P54252 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATXN3P54252 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATXN3P54252 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATXN3P54252 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.59■□□□□ 0.41
ATXN3P54252 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 AC097374.2-201ENST00000618617 1306 ntBASIC17.59■□□□□ 0.41
ATXN3P54252 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ATXN3P54252 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
ATXN3P54252 AC006557.2-201ENST00000592985 1240 ntBASIC17.59■□□□□ 0.41
ATXN3P54252 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.59■□□□□ 0.41
ATXN3P54252 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATXN3P54252 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATXN3P54252 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms