Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A1P53007 UBALD1-205ENST00000590891 2641 ntBASIC15.28■□□□□ 0.04
SLC25A1P53007 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC25A1P53007 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC25A1P53007 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC25A1P53007 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC25A1P53007 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SLC25A1P53007 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC25A1P53007 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC25A1P53007 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC25A1P53007 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC25A1P53007 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 AL020989.1-201ENST00000422979 469 ntBASIC15.27■□□□□ 0.04
SLC25A1P53007 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC25A1P53007 KRT17P6-201ENST00000453795 1220 ntBASIC15.27■□□□□ 0.04
SLC25A1P53007 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC25A1P53007 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC25A1P53007 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC25A1P53007 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC25A1P53007 BNIP3P18-201ENST00000593976 575 ntBASIC15.27■□□□□ 0.04
SLC25A1P53007 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC25A1P53007 AC116407.4-201ENST00000623319 1061 ntBASIC15.27■□□□□ 0.04
SLC25A1P53007 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC25A1P53007 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC25A1P53007 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC25A1P53007 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC25A1P53007 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 PCDHB17P-201ENST00000539533 2393 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 NUS1P1-201ENST00000446295 882 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AC096582.2-201ENST00000510860 516 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 TPSP2-201ENST00000561760 610 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AP000867.4-201ENST00000641616 219 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC25A1P53007 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC25A1P53007 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 NSUN5P1-202ENST00000421140 1535 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 NSUN5P2-203ENST00000457352 1529 ntBASIC15.26■□□□□ 0.03
SLC25A1P53007 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC25A1P53007 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC25A1P53007 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC25A1P53007 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SLC25A1P53007 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms