Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC012645.4-201ENST00000610691 1061 ntBASIC18.92■□□□□ 0.62
CDK7P50613 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK7P50613 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.92■□□□□ 0.62
CDK7P50613 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK7P50613 FO538757.1-201ENST00000623083 1397 ntBASIC18.92■□□□□ 0.62
CDK7P50613 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK7P50613 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK7P50613 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 REXO1L9P-201ENST00000604264 2108 ntBASIC18.91■□□□□ 0.62
CDK7P50613 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 FAM207CP-201ENST00000443486 507 ntBASIC18.91■□□□□ 0.62
CDK7P50613 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK7P50613 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.91■□□□□ 0.62
CDK7P50613 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK7P50613 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK7P50613 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 REXO1L11P-201ENST00000620964 1927 ntBASIC18.9■□□□□ 0.62
CDK7P50613 AC008677.1-201ENST00000519230 1561 ntBASIC18.9■□□□□ 0.62
CDK7P50613 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 HMGA1P7-201ENST00000406908 502 ntBASIC18.9■□□□□ 0.62
CDK7P50613 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.9■□□□□ 0.62
CDK7P50613 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 HLA-J-202ENST00000469281 1241 ntBASIC18.9■□□□□ 0.62
CDK7P50613 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 AC026150.2-201ENST00000564693 1156 ntBASIC18.9■□□□□ 0.62
CDK7P50613 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 AL161645.1-201ENST00000622716 1255 ntBASIC18.9■□□□□ 0.62
CDK7P50613 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDK7P50613 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK7P50613 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDK7P50613 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CDK7P50613 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDK7P50613 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDK7P50613 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.89■□□□□ 0.62
CDK7P50613 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDK7P50613 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDK7P50613 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK7P50613 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK7P50613 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK7P50613 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK7P50613 GAPDHP21-201ENST00000450301 1010 ntBASIC18.89■□□□□ 0.61
CDK7P50613 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 KRT8P23-201ENST00000560090 1207 ntBASIC18.89■□□□□ 0.61
CDK7P50613 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK7P50613 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms