Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CPT1AP50416 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CPT1AP50416 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPT1AP50416 WASH6P-202ENST00000359512 1437 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.91■□□□□ 0.62
CPT1AP50416 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPT1AP50416 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CPT1AP50416 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.91■□□□□ 0.62
CPT1AP50416 BASP1P1-201ENST00000430708 665 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 AC055876.3-201ENST00000431496 288 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.91■□□□□ 0.62
CPT1AP50416 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.91■□□□□ 0.62
CPT1AP50416 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 INGX-202ENST00000489074 768 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPT1AP50416 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.91■□□□□ 0.62
CPT1AP50416 LINC01225-203ENST00000563550 1244 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.91■□□□□ 0.62
CPT1AP50416 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.91■□□□□ 0.62
CPT1AP50416 AC091167.2-201ENST00000579581 588 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 AC138649.4-201ENST00000612222 287 ntBASIC18.91■□□□□ 0.62
CPT1AP50416 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPT1AP50416 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPT1AP50416 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CPT1AP50416 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.9■□□□□ 0.62
CPT1AP50416 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 AL354751.1-201ENST00000412768 1863 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CPT1AP50416 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPT1AP50416 MIR943-201ENST00000401286 94 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 SPDYE7P-202ENST00000420373 878 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 AC107890.1-201ENST00000422478 521 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.9■□□□□ 0.62
CPT1AP50416 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.9■□□□□ 0.62
CPT1AP50416 AC125807.1-201ENST00000483097 614 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.9■□□□□ 0.62
CPT1AP50416 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.9■□□□□ 0.62
CPT1AP50416 AC084121.4-201ENST00000641598 221 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 AF228730.8-201ENST00000642140 221 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.9■□□□□ 0.62
CPT1AP50416 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 TOP3BP1-201ENST00000420768 1380 ntBASIC18.9■□□□□ 0.62
CPT1AP50416 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPT1AP50416 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPT1AP50416 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPT1AP50416 EGFEM1P-202ENST00000431685 1563 ntBASIC18.89■□□□□ 0.62
CPT1AP50416 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPT1AP50416 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPT1AP50416 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPT1AP50416 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
CPT1AP50416 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.89■□□□□ 0.61
CPT1AP50416 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.89■□□□□ 0.61
CPT1AP50416 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.89■□□□□ 0.61
CPT1AP50416 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.89■□□□□ 0.61
CPT1AP50416 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.89■□□□□ 0.61
CPT1AP50416 MIR3909-201ENST00000579518 119 ntBASIC18.89■□□□□ 0.61
CPT1AP50416 AC138761.1-201ENST00000584393 385 ntBASIC18.89■□□□□ 0.61
CPT1AP50416 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CPT1AP50416 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPT1AP50416 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms