Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.96□□□□□ -0.66
UBE2AP49459 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2AP49459 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
UBE2AP49459 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2AP49459 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2AP49459 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
UBE2AP49459 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
UBE2AP49459 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2AP49459 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
UBE2AP49459 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 AL138688.1-201ENST00000624851 1594 ntBASIC10.95□□□□□ -0.66
UBE2AP49459 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2AP49459 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
UBE2AP49459 AL645929.1-201ENST00000420084 975 ntBASIC10.95□□□□□ -0.66
UBE2AP49459 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2AP49459 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC10.95□□□□□ -0.66
UBE2AP49459 AC063952.2-201ENST00000498792 1227 ntBASIC10.95□□□□□ -0.66
UBE2AP49459 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2AP49459 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
UBE2AP49459 RN7SL850P-201ENST00000579959 291 ntBASIC10.95□□□□□ -0.66
UBE2AP49459 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
UBE2AP49459 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2AP49459 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
UBE2AP49459 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
UBE2AP49459 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2AP49459 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2AP49459 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2AP49459 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2AP49459 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2AP49459 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2AP49459 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2AP49459 SAPCD2P2-201ENST00000431719 1174 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms