Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HOXA11P31270 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HOXA11P31270 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HOXA11P31270 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 AC012569.1-201ENST00000591191 1524 ntBASIC18.46■□□□□ 0.55
HOXA11P31270 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HOXA11P31270 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.46■□□□□ 0.55
HOXA11P31270 AC004461.1-201ENST00000412461 403 ntBASIC18.46■□□□□ 0.55
HOXA11P31270 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.46■□□□□ 0.55
HOXA11P31270 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.46■□□□□ 0.55
HOXA11P31270 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXA11P31270 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXA11P31270 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.46■□□□□ 0.55
HOXA11P31270 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HOXA11P31270 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.46■□□□□ 0.55
HOXA11P31270 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HOXA11P31270 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.46■□□□□ 0.54
HOXA11P31270 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HOXA11P31270 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.45■□□□□ 0.54
HOXA11P31270 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.45■□□□□ 0.54
HOXA11P31270 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.45■□□□□ 0.54
HOXA11P31270 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.45■□□□□ 0.54
HOXA11P31270 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AC027796.2-201ENST00000575326 344 ntBASIC18.45■□□□□ 0.54
HOXA11P31270 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 AC022145.2-201ENST00000598203 171 ntBASIC18.45■□□□□ 0.54
HOXA11P31270 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 LINC02012-201ENST00000608206 1725 ntBASIC18.45■□□□□ 0.54
HOXA11P31270 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HOXA11P31270 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HOXA11P31270 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXA11P31270 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 AL355306.1-201ENST00000415580 579 ntBASIC18.44■□□□□ 0.54
HOXA11P31270 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 METTL21AP1-201ENST00000438852 635 ntBASIC18.44■□□□□ 0.54
HOXA11P31270 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXA11P31270 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXA11P31270 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.44■□□□□ 0.54
HOXA11P31270 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.44■□□□□ 0.54
HOXA11P31270 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.44■□□□□ 0.54
HOXA11P31270 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.44■□□□□ 0.54
HOXA11P31270 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HOXA11P31270 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HOXA11P31270 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.43■□□□□ 0.54
HOXA11P31270 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HOXA11P31270 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms