Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXA6P31267 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 LINC00304-203ENST00000565008 1864 ntBASIC16.78■□□□□ 0.28
HOXA6P31267 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 AC087499.5-201ENST00000452760 1342 ntBASIC16.78■□□□□ 0.28
HOXA6P31267 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXA6P31267 U91328.1-201ENST00000437528 223 ntBASIC16.78■□□□□ 0.28
HOXA6P31267 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXA6P31267 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXA6P31267 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXA6P31267 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 AC003101.2-201ENST00000612557 442 ntBASIC16.78■□□□□ 0.28
HOXA6P31267 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.78■□□□□ 0.28
HOXA6P31267 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXA6P31267 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXA6P31267 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXA6P31267 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HOXA6P31267 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HOXA6P31267 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HOXA6P31267 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.77■□□□□ 0.28
HOXA6P31267 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
HOXA6P31267 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HOXA6P31267 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.77■□□□□ 0.28
HOXA6P31267 GPR53P-205ENST00000457298 1084 ntBASIC16.77■□□□□ 0.28
HOXA6P31267 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.77■□□□□ 0.28
HOXA6P31267 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXA6P31267 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXA6P31267 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.77■□□□□ 0.27
HOXA6P31267 AC138028.4-201ENST00000564984 1845 ntBASIC16.77■□□□□ 0.27
HOXA6P31267 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HOXA6P31267 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXA6P31267 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXA6P31267 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA6P31267 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA6P31267 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA6P31267 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HOXA6P31267 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HOXA6P31267 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA6P31267 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA6P31267 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA6P31267 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA6P31267 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA6P31267 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.76■□□□□ 0.27
HOXA6P31267 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA6P31267 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms