Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF1P30408 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF1P30408 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.12■□□□□ 0.97
TM4SF1P30408 HLA-V-204ENST00000476601 1289 ntBASIC21.12■□□□□ 0.97
TM4SF1P30408 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.12■□□□□ 0.97
TM4SF1P30408 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF1P30408 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF1P30408 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF1P30408 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF1P30408 AC073389.1-201ENST00000595595 795 ntBASIC21.12■□□□□ 0.97
TM4SF1P30408 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TM4SF1P30408 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF1P30408 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF1P30408 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.12■□□□□ 0.97
TM4SF1P30408 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF1P30408 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.11■□□□□ 0.97
TM4SF1P30408 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TM4SF1P30408 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.11■□□□□ 0.97
TM4SF1P30408 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.11■□□□□ 0.97
TM4SF1P30408 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.11■□□□□ 0.97
TM4SF1P30408 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.11■□□□□ 0.97
TM4SF1P30408 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.11■□□□□ 0.97
TM4SF1P30408 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.11■□□□□ 0.97
TM4SF1P30408 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.11■□□□□ 0.97
TM4SF1P30408 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF1P30408 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 TP53TG3HP-202ENST00000569755 579 ntBASIC21.11■□□□□ 0.97
TM4SF1P30408 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.11■□□□□ 0.97
TM4SF1P30408 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF1P30408 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
TM4SF1P30408 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
TM4SF1P30408 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
TM4SF1P30408 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 AC087289.5-201ENST00000586076 3175 ntBASIC21.11■□□□□ 0.97
TM4SF1P30408 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF1P30408 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.1■□□□□ 0.97
TM4SF1P30408 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TM4SF1P30408 AC120498.9-201ENST00000339021 3867 ntBASIC21.1■□□□□ 0.97
TM4SF1P30408 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
TM4SF1P30408 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF1P30408 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.1■□□□□ 0.97
TM4SF1P30408 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 AC003101.2-201ENST00000612557 442 ntBASIC21.1■□□□□ 0.97
TM4SF1P30408 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TM4SF1P30408 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
TM4SF1P30408 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 FOXO1B-201ENST00000504678 1527 ntBASIC21.09■□□□□ 0.97
TM4SF1P30408 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TM4SF1P30408 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TM4SF1P30408 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TM4SF1P30408 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 AC105233.2-201ENST00000523697 349 ntBASIC21.09■□□□□ 0.97
TM4SF1P30408 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF1P30408 AF228730.5-201ENST00000530288 346 ntBASIC21.09■□□□□ 0.97
TM4SF1P30408 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms