Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL3P19876 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCL3P19876 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.46□□□□□ -0.1
CXCL3P19876 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.46□□□□□ -0.1
CXCL3P19876 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CXCL3P19876 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CXCL3P19876 AL391256.1-201ENST00000443260 1855 ntBASIC14.46□□□□□ -0.1
CXCL3P19876 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL3P19876 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL3P19876 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL3P19876 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL3P19876 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CXCL3P19876 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.45□□□□□ -0.1
CXCL3P19876 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.45□□□□□ -0.1
CXCL3P19876 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.45□□□□□ -0.1
CXCL3P19876 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 AC092666.2-201ENST00000613287 246 ntBASIC14.45□□□□□ -0.1
CXCL3P19876 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL3P19876 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CXCL3P19876 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL3P19876 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 AC104581.4-201ENST00000623126 3052 ntBASIC14.44□□□□□ -0.1
CXCL3P19876 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 KRT8P7-201ENST00000533003 1432 ntBASIC14.44□□□□□ -0.1
CXCL3P19876 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.44□□□□□ -0.1
CXCL3P19876 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CXCL3P19876 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.44□□□□□ -0.1
CXCL3P19876 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.44□□□□□ -0.1
CXCL3P19876 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 CICP4-201ENST00000447359 2812 ntBASIC14.44□□□□□ -0.1
CXCL3P19876 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL3P19876 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL3P19876 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CXCL3P19876 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL3P19876 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL3P19876 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL3P19876 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CXCL3P19876 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms