Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC092068.3-201ENST00000587894 2016 ntBASIC17.69■□□□□ 0.42
ERCC2P18074 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ERCC2P18074 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC2P18074 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ERCC2P18074 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.68■□□□□ 0.42
ERCC2P18074 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 LAGE3P1-201ENST00000425356 484 ntBASIC17.68■□□□□ 0.42
ERCC2P18074 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.68■□□□□ 0.42
ERCC2P18074 HNRNPDP1-201ENST00000439535 754 ntBASIC17.68■□□□□ 0.42
ERCC2P18074 AC018712.1-201ENST00000455767 687 ntBASIC17.68■□□□□ 0.42
ERCC2P18074 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ERCC2P18074 OR7E14P-202ENST00000530490 1290 ntBASIC17.68■□□□□ 0.42
ERCC2P18074 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.68■□□□□ 0.42
ERCC2P18074 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.68■□□□□ 0.42
ERCC2P18074 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 PCDHA12-202ENST00000613593 2588 ntBASIC17.68■□□□□ 0.42
ERCC2P18074 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.68■□□□□ 0.42
ERCC2P18074 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERCC2P18074 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC2P18074 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ERCC2P18074 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC2P18074 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 KRT18P67-201ENST00000432816 1264 ntBASIC17.67■□□□□ 0.42
ERCC2P18074 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.67■□□□□ 0.42
ERCC2P18074 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC2P18074 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC2P18074 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.67■□□□□ 0.42
ERCC2P18074 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.67■□□□□ 0.42
ERCC2P18074 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 AC148477.8-201ENST00000624298 468 ntBASIC17.67■□□□□ 0.42
ERCC2P18074 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 AL121761.2-201ENST00000598007 1648 ntBASIC17.67■□□□□ 0.42
ERCC2P18074 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.67■□□□□ 0.42
ERCC2P18074 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
ERCC2P18074 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ERCC2P18074 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERCC2P18074 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ERCC2P18074 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC2P18074 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC2P18074 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms