Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.72■□□□□ 0.43
BRAFP15056 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 CLEC4GP1-201ENST00000596555 870 ntBASIC17.72■□□□□ 0.43
BRAFP15056 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.72■□□□□ 0.43
BRAFP15056 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRAFP15056 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BRAFP15056 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BRAFP15056 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.71■□□□□ 0.43
BRAFP15056 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
BRAFP15056 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
BRAFP15056 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 AC079328.2-201ENST00000561241 3354 ntBASIC17.71■□□□□ 0.43
BRAFP15056 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.71■□□□□ 0.43
BRAFP15056 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.71■□□□□ 0.43
BRAFP15056 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
BRAFP15056 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.71■□□□□ 0.43
BRAFP15056 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.71■□□□□ 0.43
BRAFP15056 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRAFP15056 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BRAFP15056 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
BRAFP15056 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.71■□□□□ 0.42
BRAFP15056 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRAFP15056 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
BRAFP15056 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 AC046185.3-201ENST00000623228 1824 ntBASIC17.7■□□□□ 0.42
BRAFP15056 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
BRAFP15056 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 AL845331.1-201ENST00000424978 1190 ntBASIC17.7■□□□□ 0.42
BRAFP15056 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRAFP15056 DUSP5P1-201ENST00000441325 1139 ntBASIC17.7■□□□□ 0.42
BRAFP15056 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 GUSBP12-201ENST00000513727 720 ntBASIC17.7■□□□□ 0.42
BRAFP15056 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.7■□□□□ 0.42
BRAFP15056 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.7■□□□□ 0.42
BRAFP15056 AC124864.1-201ENST00000623408 392 ntBASIC17.7■□□□□ 0.42
BRAFP15056 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRAFP15056 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
BRAFP15056 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms