Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 SPCS2P4-201ENST00000436160 681 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.3■□□□□ 0.68
COL11A1P12107 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 AC138761.1-201ENST00000584393 385 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
COL11A1P12107 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.3■□□□□ 0.68
COL11A1P12107 MRPS18AP1-201ENST00000414458 589 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 AC125807.1-201ENST00000483097 614 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COL11A1P12107 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.3■□□□□ 0.68
COL11A1P12107 LINC01225-203ENST00000563550 1244 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 AC008267.7-201ENST00000624570 1194 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 LINC00895-201ENST00000629028 1637 ntBASIC19.3■□□□□ 0.68
COL11A1P12107 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.29■□□□□ 0.68
COL11A1P12107 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.29■□□□□ 0.68
COL11A1P12107 CROCCP2-202ENST00000412962 2773 ntBASIC19.29■□□□□ 0.68
COL11A1P12107 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
COL11A1P12107 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.29■□□□□ 0.68
COL11A1P12107 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL11A1P12107 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.29■□□□□ 0.68
COL11A1P12107 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.29■□□□□ 0.68
COL11A1P12107 KRT8P49-201ENST00000604166 1432 ntBASIC19.29■□□□□ 0.68
COL11A1P12107 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.29■□□□□ 0.68
COL11A1P12107 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL11A1P12107 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.29■□□□□ 0.68
COL11A1P12107 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL11A1P12107 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.28■□□□□ 0.68
COL11A1P12107 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.28■□□□□ 0.68
COL11A1P12107 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 TUBB3P1-201ENST00000405796 1332 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 AC236430.1-201ENST00000402231 743 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 AC055876.3-201ENST00000431496 288 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.28■□□□□ 0.68
COL11A1P12107 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.28■□□□□ 0.68
COL11A1P12107 AC124947.2-201ENST00000547118 1133 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL11A1P12107 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL11A1P12107 AC138649.4-201ENST00000612222 287 ntBASIC19.28■□□□□ 0.68
COL11A1P12107 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL11A1P12107 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms