Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 GK-202ENST00000378941 458 ntTSL 3 BASIC29.65■■■□□ 2.34
TOP2AP11388 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC29.65■■■□□ 2.34
TOP2AP11388 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC29.65■■■□□ 2.34
TOP2AP11388 PIN1P1-201ENST00000412108 996 ntBASIC29.65■■■□□ 2.34
TOP2AP11388 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC29.65■■■□□ 2.34
TOP2AP11388 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 AC027369.6-201ENST00000525520 931 ntBASIC29.65■■■□□ 2.34
TOP2AP11388 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 AP001350.2-201ENST00000625104 1094 ntBASIC29.65■■■□□ 2.34
TOP2AP11388 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TOP2AP11388 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC29.65■■■□□ 2.34
TOP2AP11388 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
TOP2AP11388 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC29.64■■■□□ 2.34
TOP2AP11388 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 HLA-H-201ENST00000383620 1096 ntBASIC29.64■■■□□ 2.34
TOP2AP11388 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC29.64■■■□□ 2.34
TOP2AP11388 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC29.64■■■□□ 2.34
TOP2AP11388 AC008738.7-201ENST00000609744 511 ntBASIC29.64■■■□□ 2.34
TOP2AP11388 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
TOP2AP11388 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TOP2AP11388 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC29.64■■■□□ 2.34
TOP2AP11388 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC29.64■■■□□ 2.34
TOP2AP11388 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC29.64■■■□□ 2.33
TOP2AP11388 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
TOP2AP11388 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC29.63■■■□□ 2.33
TOP2AP11388 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC29.63■■■□□ 2.33
TOP2AP11388 GRAMD4P3-201ENST00000621665 1669 ntBASIC29.63■■■□□ 2.33
TOP2AP11388 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
TOP2AP11388 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC29.63■■■□□ 2.33
TOP2AP11388 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
TOP2AP11388 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC29.63■■■□□ 2.33
TOP2AP11388 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC29.63■■■□□ 2.33
TOP2AP11388 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
TOP2AP11388 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
TOP2AP11388 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 OR8S1-201ENST00000310194 1080 ntBASIC29.62■■■□□ 2.33
TOP2AP11388 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC29.62■■■□□ 2.33
TOP2AP11388 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC29.62■■■□□ 2.33
TOP2AP11388 AL512638.1-201ENST00000457493 794 ntBASIC29.62■■■□□ 2.33
TOP2AP11388 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC29.62■■■□□ 2.33
TOP2AP11388 CR383656.12-201ENST00000549567 513 ntBASIC29.62■■■□□ 2.33
TOP2AP11388 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC29.62■■■□□ 2.33
TOP2AP11388 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC29.62■■■□□ 2.33
TOP2AP11388 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC29.62■■■□□ 2.33
TOP2AP11388 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC29.62■■■□□ 2.33
TOP2AP11388 AL358472.5-202ENST00000641448 1267 ntBASIC29.62■■■□□ 2.33
TOP2AP11388 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
TOP2AP11388 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC29.62■■■□□ 2.33
TOP2AP11388 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
TOP2AP11388 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TOP2AP11388 HNRNPA3P1-201ENST00000401429 1139 ntBASIC29.61■■■□□ 2.33
TOP2AP11388 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC29.61■■■□□ 2.33
TOP2AP11388 HNRNPA3P5-201ENST00000455201 833 ntBASIC29.61■■■□□ 2.33
TOP2AP11388 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC29.61■■■□□ 2.33
TOP2AP11388 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TOP2AP11388 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC29.61■■■□□ 2.33
TOP2AP11388 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC29.61■■■□□ 2.33
TOP2AP11388 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC29.61■■■□□ 2.33
TOP2AP11388 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TOP2AP11388 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC29.61■■■□□ 2.33
TOP2AP11388 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC29.61■■■□□ 2.33
TOP2AP11388 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
TOP2AP11388 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TOP2AP11388 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC29.61■■■□□ 2.33
TOP2AP11388 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC29.61■■■□□ 2.33
TOP2AP11388 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC29.61■■■□□ 2.33
TOP2AP11388 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TOP2AP11388 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
TOP2AP11388 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC29.6■■■□□ 2.33
TOP2AP11388 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 PP14571-201ENST00000404327 934 ntTSL 2 BASIC29.6■■■□□ 2.33
TOP2AP11388 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC29.6■■■□□ 2.33
TOP2AP11388 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC29.6■■■□□ 2.33
TOP2AP11388 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
TOP2AP11388 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms