Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 SLC25A1P3-201ENST00000395415 828 ntBASIC17.3■□□□□ 0.36
SRPRAP08240 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.3■□□□□ 0.36
SRPRAP08240 REXO1L3P-201ENST00000622202 1288 ntBASIC17.3■□□□□ 0.36
SRPRAP08240 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.3■□□□□ 0.36
SRPRAP08240 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPRAP08240 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPRAP08240 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.29■□□□□ 0.36
SRPRAP08240 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 AP006288.1-201ENST00000446065 395 ntBASIC17.29■□□□□ 0.36
SRPRAP08240 ACTG1P14-201ENST00000446382 1122 ntBASIC17.29■□□□□ 0.36
SRPRAP08240 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.29■□□□□ 0.36
SRPRAP08240 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SRPRAP08240 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
SRPRAP08240 AP001160.2-201ENST00000596071 487 ntBASIC17.29■□□□□ 0.36
SRPRAP08240 AC068137.2-201ENST00000605408 478 ntBASIC17.29■□□□□ 0.36
SRPRAP08240 AL645728.2-201ENST00000641974 660 ntBASIC17.29■□□□□ 0.36
SRPRAP08240 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.29■□□□□ 0.36
SRPRAP08240 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRPRAP08240 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SRPRAP08240 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPRAP08240 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 ELL2P1-201ENST00000413990 1906 ntBASIC17.28■□□□□ 0.36
SRPRAP08240 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.28■□□□□ 0.36
SRPRAP08240 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.28■□□□□ 0.36
SRPRAP08240 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.28■□□□□ 0.36
SRPRAP08240 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SRPRAP08240 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 AC005412.3-201ENST00000580309 715 ntBASIC17.28■□□□□ 0.36
SRPRAP08240 MIR4469-201ENST00000583919 79 ntBASIC17.28■□□□□ 0.36
SRPRAP08240 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 AL078644.1-201ENST00000609881 752 ntBASIC17.28■□□□□ 0.36
SRPRAP08240 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRPRAP08240 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPRAP08240 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.27■□□□□ 0.36
SRPRAP08240 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.27■□□□□ 0.36
SRPRAP08240 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SRPRAP08240 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.27■□□□□ 0.36
SRPRAP08240 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SRPRAP08240 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.27■□□□□ 0.36
SRPRAP08240 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.27■□□□□ 0.36
SRPRAP08240 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SRPRAP08240 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPRAP08240 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms