Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.83■□□□□ 0.44
IFNB1P01574 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 AC091607.1-201ENST00000490318 1060 ntBASIC17.83■□□□□ 0.44
IFNB1P01574 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
IFNB1P01574 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.83■□□□□ 0.44
IFNB1P01574 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.83■□□□□ 0.44
IFNB1P01574 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.83■□□□□ 0.44
IFNB1P01574 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
IFNB1P01574 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
IFNB1P01574 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFNB1P01574 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.82■□□□□ 0.44
IFNB1P01574 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IFNB1P01574 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
IFNB1P01574 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IFNB1P01574 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IFNB1P01574 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNB1P01574 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNB1P01574 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.82■□□□□ 0.44
IFNB1P01574 BX276092.5-203ENST00000456199 560 ntBASIC17.82■□□□□ 0.44
IFNB1P01574 VENTXP7-201ENST00000475503 772 ntBASIC17.82■□□□□ 0.44
IFNB1P01574 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNB1P01574 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.82■□□□□ 0.44
IFNB1P01574 STK25P1-201ENST00000585406 838 ntBASIC17.82■□□□□ 0.44
IFNB1P01574 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
IFNB1P01574 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNB1P01574 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
IFNB1P01574 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNB1P01574 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNB1P01574 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IFNB1P01574 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 RNF216P1-203ENST00000404404 2427 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
IFNB1P01574 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.81■□□□□ 0.44
IFNB1P01574 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IFNB1P01574 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IFNB1P01574 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
IFNB1P01574 AL031133.1-201ENST00000406807 723 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 AC246785.2-201ENST00000432512 513 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.81■□□□□ 0.44
IFNB1P01574 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
IFNB1P01574 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.81■□□□□ 0.44
IFNB1P01574 KRT18P21-201ENST00000515767 1272 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 NTF6B-201ENST00000591913 560 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 AL121672.3-201ENST00000608644 468 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.81■□□□□ 0.44
IFNB1P01574 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.81■□□□□ 0.44
IFNB1P01574 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IFNB1P01574 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
IFNB1P01574 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNB1P01574 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.8■□□□□ 0.44
IFNB1P01574 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.8■□□□□ 0.44
IFNB1P01574 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFNB1P01574 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.8■□□□□ 0.44
IFNB1P01574 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.8■□□□□ 0.44
IFNB1P01574 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.8■□□□□ 0.44
IFNB1P01574 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
IFNB1P01574 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFNB1P01574 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.8■□□□□ 0.44
IFNB1P01574 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFNB1P01574 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFNB1P01574 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.8■□□□□ 0.44
IFNB1P01574 CHCHD2P8-201ENST00000429873 447 ntBASIC17.8■□□□□ 0.44
IFNB1P01574 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
IFNB1P01574 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.8■□□□□ 0.44
IFNB1P01574 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.8■□□□□ 0.44
IFNB1P01574 STK19B-204ENST00000512515 211 ntBASIC17.8■□□□□ 0.44
IFNB1P01574 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms