Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 KRT19P2-202ENST00000557173 1012 ntBASIC17.05■□□□□ 0.32
PCDHGA12O60330 AL031432.2-201ENST00000566714 459 ntBASIC17.05■□□□□ 0.32
PCDHGA12O60330 AL928711.1-201ENST00000570165 459 ntBASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC109462.3-201ENST00000573934 613 ntBASIC17.05■□□□□ 0.32
PCDHGA12O60330 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC106820.2-201ENST00000563775 3264 ntBASIC17.05■□□□□ 0.32
PCDHGA12O60330 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA12O60330 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA12O60330 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 AL096828.2-201ENST00000567259 1965 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 BCAR1-209ENST00000546196 1340 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 PTCHD3P3-201ENST00000403073 906 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 STK19B-204ENST00000512515 211 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 AP000344.2-201ENST00000512987 629 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 IGHV3-52-201ENST00000519770 353 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 AL353135.1-201ENST00000606729 504 ntBASIC17.04■□□□□ 0.32
PCDHGA12O60330 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA12O60330 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA12O60330 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 PCDHA12-202ENST00000613593 2588 ntBASIC17.03■□□□□ 0.32
PCDHGA12O60330 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 BX276092.7-203ENST00000637198 1536 ntBASIC17.03■□□□□ 0.32
PCDHGA12O60330 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 AC092364.2-202ENST00000597012 1073 ntBASIC17.03■□□□□ 0.32
PCDHGA12O60330 AC027612.4-201ENST00000605371 583 ntBASIC17.03■□□□□ 0.32
PCDHGA12O60330 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 AC007064.4-201ENST00000637740 555 ntBASIC17.03■□□□□ 0.32
PCDHGA12O60330 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA12O60330 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA12O60330 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms