Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 MIR574-201ENST00000385209 96 ntBASIC17.39■□□□□ 0.37
KDELR3O43731 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KDELR3O43731 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.39■□□□□ 0.37
KDELR3O43731 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.39■□□□□ 0.37
KDELR3O43731 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.39■□□□□ 0.37
KDELR3O43731 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.38■□□□□ 0.37
KDELR3O43731 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.38■□□□□ 0.37
KDELR3O43731 DUX4L17-201ENST00000557360 1267 ntBASIC17.38■□□□□ 0.37
KDELR3O43731 AC027601.4-201ENST00000611259 610 ntBASIC17.38■□□□□ 0.37
KDELR3O43731 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KDELR3O43731 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
KDELR3O43731 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.38■□□□□ 0.37
KDELR3O43731 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDELR3O43731 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KDELR3O43731 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 AL591424.1-201ENST00000442569 1213 ntBASIC17.37■□□□□ 0.37
KDELR3O43731 HCG4B-203ENST00000450128 991 ntBASIC17.37■□□□□ 0.37
KDELR3O43731 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.37■□□□□ 0.37
KDELR3O43731 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDELR3O43731 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.37■□□□□ 0.37
KDELR3O43731 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.37■□□□□ 0.37
KDELR3O43731 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.37■□□□□ 0.37
KDELR3O43731 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 FAM197Y3-203ENST00000618346 717 ntBASIC17.37■□□□□ 0.37
KDELR3O43731 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 AP001094.4-201ENST00000579008 2176 ntBASIC17.37■□□□□ 0.37
KDELR3O43731 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 AC129492.6-201ENST00000611383 1305 ntBASIC17.37■□□□□ 0.37
KDELR3O43731 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
KDELR3O43731 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KDELR3O43731 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KDELR3O43731 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KDELR3O43731 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
KDELR3O43731 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.36■□□□□ 0.37
KDELR3O43731 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms