Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
LDB2O43679 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.17■□□□□ 0.34
LDB2O43679 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.17■□□□□ 0.34
LDB2O43679 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 DUX4L17-201ENST00000557360 1267 ntBASIC17.17■□□□□ 0.34
LDB2O43679 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.17■□□□□ 0.34
LDB2O43679 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.17■□□□□ 0.34
LDB2O43679 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LDB2O43679 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.17■□□□□ 0.34
LDB2O43679 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 AC004706.3-202ENST00000621574 984 ntBASIC17.17■□□□□ 0.34
LDB2O43679 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
LDB2O43679 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
LDB2O43679 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LDB2O43679 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.16■□□□□ 0.34
LDB2O43679 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.16■□□□□ 0.34
LDB2O43679 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 AL121912.1-201ENST00000603683 238 ntBASIC17.16■□□□□ 0.34
LDB2O43679 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.16■□□□□ 0.34
LDB2O43679 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.16■□□□□ 0.34
LDB2O43679 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LDB2O43679 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.15■□□□□ 0.34
LDB2O43679 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 AC107918.4-202ENST00000641623 219 ntBASIC17.15■□□□□ 0.34
LDB2O43679 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 AGGF1P2-201ENST00000426656 2106 ntBASIC17.15■□□□□ 0.34
LDB2O43679 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
LDB2O43679 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
LDB2O43679 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LDB2O43679 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.15■□□□□ 0.34
LDB2O43679 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms