Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP2AO43633 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2AO43633 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 AC093525.9-201ENST00000624961 1746 ntBASIC19.34■□□□□ 0.69
CHMP2AO43633 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHMP2AO43633 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP2AO43633 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2AO43633 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHMP2AO43633 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP2AO43633 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CHMP2AO43633 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2AO43633 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP2AO43633 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP2AO43633 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
CHMP2AO43633 MED15P5-201ENST00000423150 992 ntBASIC19.33■□□□□ 0.68
CHMP2AO43633 PMS2P1-201ENST00000431037 1228 ntBASIC19.33■□□□□ 0.68
CHMP2AO43633 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP2AO43633 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CHMP2AO43633 AC140113.2-201ENST00000604370 208 ntBASIC19.33■□□□□ 0.68
CHMP2AO43633 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHMP2AO43633 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP2AO43633 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP2AO43633 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHMP2AO43633 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 AC016396.2-201ENST00000562575 1417 ntBASIC19.33■□□□□ 0.68
CHMP2AO43633 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP2AO43633 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHMP2AO43633 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHMP2AO43633 SLC25A1P3-201ENST00000395415 828 ntBASIC19.32■□□□□ 0.68
CHMP2AO43633 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMP2AO43633 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP2AO43633 KRT18P58-201ENST00000527480 1120 ntBASIC19.32■□□□□ 0.68
CHMP2AO43633 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP2AO43633 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP2AO43633 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
CHMP2AO43633 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.31■□□□□ 0.68
CHMP2AO43633 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2AO43633 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2AO43633 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHMP2AO43633 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms