Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC139887.3-201ENST00000568585 713 ntBASIC23.66■■□□□ 1.38
MSH5O43196 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MSH5O43196 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.66■■□□□ 1.38
MSH5O43196 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
MSH5O43196 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.66■■□□□ 1.38
MSH5O43196 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSH5O43196 AC008608.2-201ENST00000606089 416 ntBASIC23.66■■□□□ 1.38
MSH5O43196 AC128687.2-201ENST00000609657 566 ntBASIC23.66■■□□□ 1.38
MSH5O43196 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC23.66■■□□□ 1.38
MSH5O43196 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
MSH5O43196 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
MSH5O43196 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSH5O43196 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.66■■□□□ 1.38
MSH5O43196 AL162727.3-201ENST00000635661 2787 ntBASIC23.66■■□□□ 1.38
MSH5O43196 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MSH5O43196 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
MSH5O43196 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.66■■□□□ 1.38
MSH5O43196 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
MSH5O43196 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC23.65■■□□□ 1.38
MSH5O43196 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 RCC2P3-201ENST00000418112 1537 ntBASIC23.65■■□□□ 1.38
MSH5O43196 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.65■■□□□ 1.38
MSH5O43196 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.65■■□□□ 1.38
MSH5O43196 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 RANP7-201ENST00000418085 644 ntBASIC23.65■■□□□ 1.38
MSH5O43196 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC23.65■■□□□ 1.38
MSH5O43196 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
MSH5O43196 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
MSH5O43196 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC23.65■■□□□ 1.38
MSH5O43196 AC105313.1-201ENST00000509121 353 ntBASIC23.65■■□□□ 1.38
MSH5O43196 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC23.65■■□□□ 1.38
MSH5O43196 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.65■■□□□ 1.38
MSH5O43196 AC055717.3-201ENST00000622967 595 ntBASIC23.65■■□□□ 1.38
MSH5O43196 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.65■■□□□ 1.38
MSH5O43196 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
MSH5O43196 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MSH5O43196 AC011676.5-201ENST00000624864 2660 ntBASIC23.65■■□□□ 1.38
MSH5O43196 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MSH5O43196 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MSH5O43196 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MSH5O43196 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
MSH5O43196 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
MSH5O43196 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 APTX-203ENST00000379813 1121 ntTSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 POM121L3P-201ENST00000419331 1163 ntBASIC23.64■■□□□ 1.37
MSH5O43196 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC23.64■■□□□ 1.37
MSH5O43196 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.64■■□□□ 1.37
MSH5O43196 HNRNPA1P5-201ENST00000558213 966 ntBASIC23.64■■□□□ 1.37
MSH5O43196 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 MIR5100-201ENST00000579544 119 ntBASIC23.64■■□□□ 1.37
MSH5O43196 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.64■■□□□ 1.37
MSH5O43196 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 MAPK10-350ENST00000641777 965 ntBASIC23.64■■□□□ 1.37
MSH5O43196 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 PCDH8P1-201ENST00000428983 2773 ntBASIC23.64■■□□□ 1.37
MSH5O43196 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 KRT8P7-201ENST00000533003 1432 ntBASIC23.64■■□□□ 1.37
MSH5O43196 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
MSH5O43196 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.64■■□□□ 1.37
MSH5O43196 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC23.64■■□□□ 1.37
MSH5O43196 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MSH5O43196 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
MSH5O43196 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 NKILA-202ENST00000614771 2598 ntBASIC23.63■■□□□ 1.37
MSH5O43196 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.63■■□□□ 1.37
MSH5O43196 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC23.63■■□□□ 1.37
MSH5O43196 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
MSH5O43196 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC23.63■■□□□ 1.37
MSH5O43196 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MSH5O43196 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.63■■□□□ 1.37
MSH5O43196 RPS8P6-201ENST00000426177 609 ntBASIC23.63■■□□□ 1.37
MSH5O43196 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms