Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNRC18O15417 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 PCDHAC2-203ENST00000615316 3011 ntBASIC18.35■□□□□ 0.53
TNRC18O15417 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.35■□□□□ 0.53
TNRC18O15417 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 AC091804.1-201ENST00000486888 567 ntBASIC18.35■□□□□ 0.53
TNRC18O15417 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.35■□□□□ 0.53
TNRC18O15417 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.35■□□□□ 0.53
TNRC18O15417 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 LINC00565-201ENST00000562710 2331 ntBASIC18.35■□□□□ 0.53
TNRC18O15417 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.35■□□□□ 0.53
TNRC18O15417 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.35■□□□□ 0.53
TNRC18O15417 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.35■□□□□ 0.53
TNRC18O15417 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.35■□□□□ 0.53
TNRC18O15417 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNRC18O15417 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 AL353705.2-201ENST00000428243 662 ntBASIC18.34■□□□□ 0.53
TNRC18O15417 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNRC18O15417 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNRC18O15417 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.34■□□□□ 0.53
TNRC18O15417 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.34■□□□□ 0.53
TNRC18O15417 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 AL022328.3-201ENST00000607943 679 ntBASIC18.34■□□□□ 0.53
TNRC18O15417 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.34■□□□□ 0.53
TNRC18O15417 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.34■□□□□ 0.53
TNRC18O15417 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNRC18O15417 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNRC18O15417 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNRC18O15417 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.33■□□□□ 0.53
TNRC18O15417 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNRC18O15417 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.33■□□□□ 0.53
TNRC18O15417 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNRC18O15417 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
TNRC18O15417 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.33■□□□□ 0.53
TNRC18O15417 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.33■□□□□ 0.53
TNRC18O15417 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNRC18O15417 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TNRC18O15417 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TNRC18O15417 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TNRC18O15417 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 FAM220BP-201ENST00000377689 816 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.33■□□□□ 0.52
TNRC18O15417 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.33■□□□□ 0.52
TNRC18O15417 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.33■□□□□ 0.52
TNRC18O15417 AL008638.5-201ENST00000623814 1298 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.33■□□□□ 0.52
TNRC18O15417 PHGDH-209ENST00000641074 1780 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.33■□□□□ 0.52
TNRC18O15417 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 LINC00896-202ENST00000609602 2128 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TNRC18O15417 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TNRC18O15417 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.33■□□□□ 0.52
TNRC18O15417 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.33■□□□□ 0.52
TNRC18O15417 HIST2H2BC-201ENST00000498492 580 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.33■□□□□ 0.52
TNRC18O15417 AL022328.1-201ENST00000610050 478 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 AC005695.3-201ENST00000614522 232 ntBASIC18.33■□□□□ 0.52
TNRC18O15417 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNRC18O15417 AL032819.2-201ENST00000624543 2162 ntBASIC18.32■□□□□ 0.52
TNRC18O15417 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.32■□□□□ 0.52
TNRC18O15417 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TNRC18O15417 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNRC18O15417 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms