Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 AC005104.2-201ENST00000427818 678 ntBASIC14.68□□□□□ -0.06
SDCBPO00560 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.68□□□□□ -0.06
SDCBPO00560 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.68□□□□□ -0.06
SDCBPO00560 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.68□□□□□ -0.06
SDCBPO00560 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.68□□□□□ -0.06
SDCBPO00560 AL390719.2-201ENST00000606993 987 ntBASIC14.68□□□□□ -0.06
SDCBPO00560 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 LINC02012-201ENST00000608206 1725 ntBASIC14.68□□□□□ -0.06
SDCBPO00560 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.68□□□□□ -0.06
SDCBPO00560 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.68□□□□□ -0.06
SDCBPO00560 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.68□□□□□ -0.06
SDCBPO00560 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SDCBPO00560 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.67□□□□□ -0.06
SDCBPO00560 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 KRT18P21-201ENST00000515767 1272 ntBASIC14.67□□□□□ -0.06
SDCBPO00560 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.67□□□□□ -0.06
SDCBPO00560 AC083849.1-201ENST00000615227 514 ntBASIC14.67□□□□□ -0.06
SDCBPO00560 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.67□□□□□ -0.06
SDCBPO00560 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.67□□□□□ -0.06
SDCBPO00560 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.67□□□□□ -0.06
SDCBPO00560 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SDCBPO00560 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.66□□□□□ -0.06
SDCBPO00560 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
SDCBPO00560 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SDCBPO00560 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SDCBPO00560 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SDCBPO00560 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.66□□□□□ -0.06
SDCBPO00560 AL645929.1-201ENST00000420084 975 ntBASIC14.66□□□□□ -0.06
SDCBPO00560 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms