Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM1O00151 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM1O00151 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM1O00151 AC116407.2-201ENST00000613639 860 ntBASIC16.43■□□□□ 0.22
PDLIM1O00151 AC011558.1-201ENST00000623459 338 ntBASIC16.43■□□□□ 0.22
PDLIM1O00151 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 LINC00167-201ENST00000530583 1419 ntBASIC16.43■□□□□ 0.22
PDLIM1O00151 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM1O00151 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM1O00151 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDLIM1O00151 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 RNF152P1-201ENST00000397754 604 ntBASIC16.42■□□□□ 0.22
PDLIM1O00151 AK4P3-201ENST00000418260 669 ntBASIC16.42■□□□□ 0.22
PDLIM1O00151 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.42■□□□□ 0.22
PDLIM1O00151 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM1O00151 AL441883.1-201ENST00000566170 1045 ntBASIC16.42■□□□□ 0.22
PDLIM1O00151 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 AL023973.1-201ENST00000624619 620 ntBASIC16.42■□□□□ 0.22
PDLIM1O00151 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM1O00151 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 AC078925.2-201ENST00000624013 1973 ntBASIC16.42■□□□□ 0.22
PDLIM1O00151 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM1O00151 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM1O00151 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM1O00151 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.41■□□□□ 0.22
PDLIM1O00151 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM1O00151 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.41■□□□□ 0.22
PDLIM1O00151 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM1O00151 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.41■□□□□ 0.22
PDLIM1O00151 AC063952.2-201ENST00000498792 1227 ntBASIC16.41■□□□□ 0.22
PDLIM1O00151 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PDLIM1O00151 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.41■□□□□ 0.22
PDLIM1O00151 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM1O00151 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms