Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 AC008764.6-201ENST00000595909 2069 ntBASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1G3Q9Y6M4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 METTL21AP1-201ENST00000438852 635 ntBASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 AL031432.2-201ENST00000566714 459 ntBASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 AL928711.1-201ENST00000570165 459 ntBASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1G3Q9Y6M4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 AC129492.6-201ENST00000611383 1305 ntBASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 FAM58CP-201ENST00000435741 640 ntBASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 AP000344.2-201ENST00000512987 629 ntBASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1G3Q9Y6M4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1G3Q9Y6M4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms