Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 AC097493.3-201ENST00000509725 367 ntBASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 GNAS-203ENST00000306120 1878 ntBASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC2Q9Y5Z7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 WASH6P-202ENST00000359512 1437 ntBASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 AL512638.1-201ENST00000457493 794 ntBASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 AC069120.2-201ENST00000524091 540 ntBASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC2Q9Y5Z7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 LINC00304-203ENST00000565008 1864 ntBASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC2Q9Y5Z7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 AL353732.1-201ENST00000569618 1459 ntBASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.83■□□□□ 0.45
HCFC2Q9Y5Z7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.83■□□□□ 0.44
HCFC2Q9Y5Z7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms