Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA11Q9Y5H2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 AC106886.4-201ENST00000623557 2502 ntBASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 AC073592.5-201ENST00000624854 528 ntBASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 AGGF1P2-201ENST00000426656 2106 ntBASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA11Q9Y5H2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 AC099336.1-202ENST00000602961 463 ntBASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA11Q9Y5H2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 LINC02012-201ENST00000608206 1725 ntBASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AC093458.2-201ENST00000623150 629 ntBASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA11Q9Y5H2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms