Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AC136632.2-201ENST00000512891 861 ntBASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 MIR1199-201ENST00000621445 119 ntBASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC4Q9Y5F7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 AC098831.1-202ENST00000438821 336 ntBASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 AC117500.6-201ENST00000624871 588 ntBASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 EGFEM1P-202ENST00000431685 1563 ntBASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC4Q9Y5F7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 AL590627.1-203ENST00000421194 1026 ntBASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 IL9RP2-201ENST00000423948 1312 ntBASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC4Q9Y5F7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGC4Q9Y5F7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms