Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 AC099343.3-201ENST00000605834 2503 ntBASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
R3HCC1Q9Y3T6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HCC1Q9Y3T6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.77■□□□□ 0.75
R3HCC1Q9Y3T6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3HCC1Q9Y3T6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
R3HCC1Q9Y3T6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 KRT18P48-201ENST00000434763 852 ntBASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 AC024563.2-201ENST00000603282 481 ntBASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HCC1Q9Y3T6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms