Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PTCHD3P3-201ENST00000403073 906 ntBASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 LINC00982-205ENST00000420957 435 ntBASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 MIR4469-201ENST00000583919 79 ntBASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SSX2IPQ9Y2D8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSX2IPQ9Y2D8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSX2IPQ9Y2D8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSX2IPQ9Y2D8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SSX2IPQ9Y2D8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 PRORSD1P-202ENST00000563365 2154 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 HTR5BP-201ENST00000430851 1154 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AC018845.2-201ENST00000568326 409 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AC007064.4-201ENST00000637740 555 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AC092865.6-201ENST00000642101 219 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 FZD10-202ENST00000539839 3282 ntBASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSX2IPQ9Y2D8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ACTG1P4-201ENST00000425123 1122 ntBASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AL596442.2-201ENST00000610240 980 ntBASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX2IPQ9Y2D8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms