Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PNMA3Q9UL41 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 TERF1P3-201ENST00000505638 1227 ntBASIC19.71■□□□□ 0.75
PNMA3Q9UL41 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 KRT8P23-201ENST00000560090 1207 ntBASIC19.71■□□□□ 0.75
PNMA3Q9UL41 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PNMA3Q9UL41 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SPDYE7P-202ENST00000420373 878 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 GPS2P2-201ENST00000430745 888 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SPCS2P4-201ENST00000436160 681 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 AC087641.1-201ENST00000557561 1021 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNMA3Q9UL41 LTB4R2-202ENST00000528054 3092 ntBASIC19.7■□□□□ 0.74
PNMA3Q9UL41 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 HMGA1P7-201ENST00000406908 502 ntBASIC19.69■□□□□ 0.74
PNMA3Q9UL41 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PNMA3Q9UL41 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms