Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 ATP5G2P4-201ENST00000442175 420 ntBASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 AC116353.5-201ENST00000638148 1699 ntBASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHRF1Q9P1Y6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 AP3S2-216ENST00000617003 1561 ntBASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 MIR6752-201ENST00000618442 71 ntBASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.66■■□□□ 1.22
PHRF1Q9P1Y6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 NME2P1-201ENST00000426182 414 ntBASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 AC004233.3-201ENST00000607794 1269 ntBASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHRF1Q9P1Y6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 IGHV3-71-201ENST00000523324 359 ntBASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PHRF1Q9P1Y6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 AC104581.1-202ENST00000635932 2618 ntBASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 FAM220BP-201ENST00000377689 816 ntBASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 PRYP6-201ENST00000514804 343 ntBASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 AL008721.1-201ENST00000609964 604 ntBASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 AC018529.1-201ENST00000613063 361 ntBASIC22.64■■□□□ 1.21
PHRF1Q9P1Y6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms