Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.46■□□□□ 0.39
NCKIPSDQ9NZQ3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCKIPSDQ9NZQ3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NCKIPSDQ9NZQ3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 AC084018.2-201ENST00000613093 2607 ntBASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 AL139288.1-201ENST00000623748 933 ntBASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCKIPSDQ9NZQ3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 RPL13AP23-201ENST00000480739 586 ntBASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 AC112698.1-201ENST00000510299 916 ntBASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCKIPSDQ9NZQ3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 NKILA-202ENST00000614771 2598 ntBASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AL356309.3-201ENST00000624132 1934 ntBASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 FAM220CP-201ENST00000395253 831 ntBASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 PMS2P7-201ENST00000506558 1336 ntBASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCKIPSDQ9NZQ3 AC011676.5-201ENST00000624864 2660 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms