Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 RPL13AP23-201ENST00000480739 586 ntBASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 DUX4L17-201ENST00000557360 1267 ntBASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 Z83851.2-201ENST00000609564 659 ntBASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 MRPL20P1-201ENST00000400819 433 ntBASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 AC004790.2-201ENST00000623588 572 ntBASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 AC104109.2-201ENST00000602919 1418 ntBASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM248Q9NWD8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 PRSS29P-201ENST00000440800 595 ntBASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 AC034105.1-201ENST00000563488 319 ntBASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM248Q9NWD8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 AC002310.6-201ENST00000624451 1377 ntBASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM248Q9NWD8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM248Q9NWD8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms