Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BLOC1S4Q9NUP1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 RNF216P1-203ENST00000404404 2427 ntBASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 PAWRP1-201ENST00000451083 565 ntBASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 AL160237.2-201ENST00000556165 472 ntBASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BLOC1S4Q9NUP1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 PCDHB17P-201ENST00000539533 2393 ntBASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 MRPL3P1-201ENST00000400109 1033 ntBASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 RNA5SP419-201ENST00000515908 135 ntBASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 AC006557.2-201ENST00000592985 1240 ntBASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 AC008735.5-201ENST00000623544 497 ntBASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BLOC1S4Q9NUP1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BLOC1S4Q9NUP1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 AL049840.3-201ENST00000602669 611 ntBASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 FAM215A-202ENST00000632077 792 ntBASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 AL805961.1-202ENST00000641562 540 ntBASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 AC078925.2-201ENST00000624013 1973 ntBASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.08■□□□□ 0.64
BLOC1S4Q9NUP1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BLOC1S4Q9NUP1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms