Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AC138649.4-201ENST00000612222 287 ntBASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM7Q9NR12 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 BASP1P1-201ENST00000430708 665 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 CNN2P2-201ENST00000443536 909 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 CNN2P3-201ENST00000450201 906 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 AC051619.7-201ENST00000568314 623 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 AL136317.3-201ENST00000618497 906 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 AC016396.2-201ENST00000562575 1417 ntBASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
PDLIM7Q9NR12 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 AC026120.1-201ENST00000611536 926 ntBASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM7Q9NR12 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 AL355306.1-201ENST00000415580 579 ntBASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 TSPY16P-201ENST00000449843 468 ntBASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ACTL9-202ENST00000612068 1252 ntBASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM7Q9NR12 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms