Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 AC106730.1-201ENST00000566722 1090 ntBASIC18.16■□□□□ 0.5
CD248Q9HCU0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 AC138028.4-201ENST00000564984 1845 ntBASIC18.16■□□□□ 0.5
CD248Q9HCU0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
CD248Q9HCU0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD248Q9HCU0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.15■□□□□ 0.5
CD248Q9HCU0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD248Q9HCU0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.15■□□□□ 0.5
CD248Q9HCU0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CD248Q9HCU0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.14■□□□□ 0.5
CD248Q9HCU0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CD248Q9HCU0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
CD248Q9HCU0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.14■□□□□ 0.5
CD248Q9HCU0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 ABCD1P5-201ENST00000445663 754 ntBASIC18.14■□□□□ 0.49
CD248Q9HCU0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 AC139887.3-201ENST00000568585 713 ntBASIC18.14■□□□□ 0.49
CD248Q9HCU0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CD248Q9HCU0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CD248Q9HCU0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms