Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NKAPP1-205ENST00000585790 367 ntBASIC15.09■□□□□ 0.01
CDH20Q9HBT6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 AL022326.1-202ENST00000641533 845 ntBASIC15.09■□□□□ 0.01
CDH20Q9HBT6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 FLJ16779-201ENST00000612722 7638 ntBASIC15.09■□□□□ 0.01
CDH20Q9HBT6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH20Q9HBT6 AC124067.4-201ENST00000519691 2379 ntBASIC15.09■□□□□ 0.01
CDH20Q9HBT6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.08■□□□□ 0.01
CDH20Q9HBT6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH20Q9HBT6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.08■□□□□ 0
CDH20Q9HBT6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CDH20Q9HBT6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH20Q9HBT6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.08■□□□□ 0
CDH20Q9HBT6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.08■□□□□ 0
CDH20Q9HBT6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 AC073592.4-201ENST00000623827 446 ntBASIC15.08■□□□□ 0
CDH20Q9HBT6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDH20Q9HBT6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 AC016396.2-201ENST00000562575 1417 ntBASIC15.08■□□□□ 0
CDH20Q9HBT6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH20Q9HBT6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.07■□□□□ 0
CDH20Q9HBT6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 SART3-203ENST00000546611 1184 ntBASIC15.07■□□□□ 0
CDH20Q9HBT6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.07■□□□□ 0
CDH20Q9HBT6 PKD1P5-201ENST00000532415 10291 ntBASIC15.07■□□□□ 0
CDH20Q9HBT6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.07■□□□□ 0
CDH20Q9HBT6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH20Q9HBT6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms