Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLK4Q9HAZ1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CLK4Q9HAZ1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLK4Q9HAZ1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.82■□□□□ 0.28
CLK4Q9HAZ1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.82■□□□□ 0.28
CLK4Q9HAZ1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AC103564.2-201ENST00000432853 1299 ntBASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AC091607.1-201ENST00000490318 1060 ntBASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 BNIP3P18-201ENST00000593976 575 ntBASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 AGGF1P2-201ENST00000426656 2106 ntBASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLK4Q9HAZ1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 AC099336.1-202ENST00000602961 463 ntBASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 FER1L4-210ENST00000615531 5998 ntBASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
CLK4Q9HAZ1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLK4Q9HAZ1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms