Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 VENTXP7-201ENST00000475503 772 ntBASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 KRT8P26-201ENST00000534154 1276 ntBASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC009533.2-201ENST00000543664 586 ntBASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 AC092053.1-201ENST00000605787 1936 ntBASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.94■□□□□ 0.14
POLR2J3Q9H1A7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 AL353593.2-201ENST00000602529 1483 ntBASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 AC011498.5-201ENST00000592027 486 ntBASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 AC005336.2-201ENST00000593183 939 ntBASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 IGHV3-41-201ENST00000613121 348 ntBASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 AL603756.1-201ENST00000606511 2163 ntBASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
POLR2J3Q9H1A7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms