Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF407Q9C0G0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 TSEN15P1-201ENST00000423257 515 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 SLC25A6P5-201ENST00000435663 894 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 PP12613-201ENST00000424958 2230 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 AP000344.2-201ENST00000512987 629 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 ACTL9-202ENST00000612068 1252 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 LETM1P2-201ENST00000597330 2178 ntBASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ZNF407Q9C0G0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 MIR4469-201ENST00000583919 79 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 PCDHB18P-201ENST00000524813 2368 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 AC092919.2-201ENST00000623631 1645 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 SLC25A1P3-201ENST00000395415 828 ntBASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF407Q9C0G0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 FAM58CP-201ENST00000435741 640 ntBASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF407Q9C0G0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms