Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 AC112482.1-201ENST00000492080 688 ntBASIC17.61■□□□□ 0.41
CIPCQ9C0C6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 MTDHP5-201ENST00000598980 586 ntBASIC17.61■□□□□ 0.41
CIPCQ9C0C6 AC055717.3-201ENST00000622967 595 ntBASIC17.61■□□□□ 0.41
CIPCQ9C0C6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 AL355312.1-201ENST00000407115 2176 ntBASIC17.61■□□□□ 0.41
CIPCQ9C0C6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 FZD10-202ENST00000539839 3282 ntBASIC17.61■□□□□ 0.41
CIPCQ9C0C6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CIPCQ9C0C6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.6■□□□□ 0.41
CIPCQ9C0C6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 AL590787.1-201ENST00000568856 1315 ntBASIC17.6■□□□□ 0.41
CIPCQ9C0C6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CIPCQ9C0C6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 AC002310.6-201ENST00000624451 1377 ntBASIC17.59■□□□□ 0.41
CIPCQ9C0C6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 RPS8P6-201ENST00000426177 609 ntBASIC17.59■□□□□ 0.41
CIPCQ9C0C6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 AC092865.6-201ENST00000642101 219 ntBASIC17.59■□□□□ 0.41
CIPCQ9C0C6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CIPCQ9C0C6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.58■□□□□ 0.41
CIPCQ9C0C6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CIPCQ9C0C6 LYSMD4-203ENST00000378904 2122 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms