Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 KLF4P1-201ENST00000412782 1185 ntBASIC15.87■□□□□ 0.13
TRIM2Q9C040 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 PRELID1P1-202ENST00000567272 903 ntBASIC15.87■□□□□ 0.13
TRIM2Q9C040 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 AL691432.3-201ENST00000621860 400 ntBASIC15.87■□□□□ 0.13
TRIM2Q9C040 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 NSUN5P1-202ENST00000421140 1535 ntBASIC15.87■□□□□ 0.13
TRIM2Q9C040 NSUN5P2-203ENST00000457352 1529 ntBASIC15.87■□□□□ 0.13
TRIM2Q9C040 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM2Q9C040 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM2Q9C040 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 TPM4P1-201ENST00000436100 807 ntBASIC15.86■□□□□ 0.13
TRIM2Q9C040 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 LINC00265-3P-201ENST00000447588 903 ntBASIC15.86■□□□□ 0.13
TRIM2Q9C040 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM2Q9C040 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM2Q9C040 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AC060834.1-201ENST00000443027 2032 ntBASIC15.85■□□□□ 0.13
TRIM2Q9C040 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM2Q9C040 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM2Q9C040 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms